Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm14836-201ENSMUST00000118567 471 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm7927-201ENSMUST00000118818 880 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm14106-201ENSMUST00000119382 438 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm11990-201ENSMUST00000121505 897 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm22959-201ENSMUST00000122514 303 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm25048-201ENSMUST00000158598 91 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm6223-201ENSMUST00000178436 871 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm4617-201ENSMUST00000178993 331 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Vis1-201ENSMUST00000183957 201 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Smc1aQ9CU62 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm24886-201ENSMUST00000104384 123 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Mir466i-201ENSMUST00000116924 121 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm13770-201ENSMUST00000117149 305 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm14563-201ENSMUST00000120571 354 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm23069-201ENSMUST00000158240 311 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm27679-201ENSMUST00000184612 84 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm5734-201ENSMUST00000189787 913 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm37774-201ENSMUST00000194401 245 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm37341-201ENSMUST00000194680 371 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm43724-201ENSMUST00000197516 226 ntBASIC6.24□□□□□ -1.41
Smc1aQ9CU62 Gm31166-201ENSMUST00000209326 288 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms