Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm43665-201ENSMUST00000198672 1659 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm26422-201ENSMUST00000104276 132 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm12842-201ENSMUST00000117298 476 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm13400-201ENSMUST00000117436 380 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm14733-201ENSMUST00000117680 133 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm12573-201ENSMUST00000118158 286 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm12045-201ENSMUST00000122122 573 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm11575-201ENSMUST00000122243 228 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm25617-201ENSMUST00000179548 133 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Mir6908-201ENSMUST00000184056 63 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm28023-201ENSMUST00000184556 60 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm27825-201ENSMUST00000184586 60 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm29650-201ENSMUST00000188485 742 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm29525-201ENSMUST00000189844 699 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm29496-201ENSMUST00000189854 693 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm29523-201ENSMUST00000191415 699 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm37288-201ENSMUST00000193963 334 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm25617-202ENSMUST00000198387 132 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Gm18628-201ENSMUST00000220584 475 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 CT025548.1-201ENSMUST00000227459 257 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Rny3-201ENSMUST00000083011 102 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
Trim11Q99PQ2 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm3160-201ENSMUST00000128343 607 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm26486-201ENSMUST00000158021 110 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm23632-201ENSMUST00000175289 125 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm21729-201ENSMUST00000180058 664 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm21853-201ENSMUST00000180071 664 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm29495-201ENSMUST00000189319 664 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm18864-201ENSMUST00000194518 1051 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm43384-201ENSMUST00000200569 637 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim11Q99PQ2 AC153971.2-201ENSMUST00000214553 777 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC7.34□□□□□ -1.23
Trim11Q99PQ2 Gm29809-201ENSMUST00000218423 493 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms