Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm13770-201ENSMUST00000117149 305 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm12813-201ENSMUST00000119615 902 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm11533-201ENSMUST00000120287 477 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm12001-201ENSMUST00000121727 913 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm15840-201ENSMUST00000122099 943 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm9428-201ENSMUST00000127214 769 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Mir7220-201ENSMUST00000183978 60 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm37934-201ENSMUST00000192902 402 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm18952-201ENSMUST00000194471 846 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm43222-201ENSMUST00000199013 603 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm18689-201ENSMUST00000203969 902 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm45628-201ENSMUST00000210849 274 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm8412-201ENSMUST00000077493 440 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Mir298-201ENSMUST00000083476 82 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh4Q99MT2 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msh4Q99MT2 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.62□□□□□ -1.51
Msh4Q99MT2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm12099-201ENSMUST00000118660 750 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm14925-201ENSMUST00000120611 438 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm8761-201ENSMUST00000121507 955 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm23408-201ENSMUST00000158523 265 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm3076-201ENSMUST00000161613 451 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Mirt2-201ENSMUST00000175179 285 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm6472-201ENSMUST00000178147 651 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Mir7211-201ENSMUST00000184071 63 ntBASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh4Q99MT2 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms