Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm2147-201ENSMUST00000193588 639 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm8137-201ENSMUST00000218997 463 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Thoc7-209ENSMUST00000225325 765 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Snord59a-201ENSMUST00000082844 74 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc38Q8CDN8 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm11826-201ENSMUST00000118781 438 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm14106-201ENSMUST00000119382 438 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm14237-201ENSMUST00000122080 430 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm23855-201ENSMUST00000158377 135 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm23115-201ENSMUST00000158480 108 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm18343-201ENSMUST00000172802 604 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm18553-201ENSMUST00000194152 634 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm43315-201ENSMUST00000198120 313 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm42990-201ENSMUST00000199231 312 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.18□□□□□ -1.42
Ccdc38Q8CDN8 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc38Q8CDN8 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms