Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm9480-201ENSMUST00000198038 616 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm18587-201ENSMUST00000213736 841 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm10064-201ENSMUST00000071235 399 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm12936-201ENSMUST00000121439 301 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Scarna13-201ENSMUST00000158164 275 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Mir6417-201ENSMUST00000183815 116 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm37445-201ENSMUST00000195318 242 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Mir409-201ENSMUST00000198153 79 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm35648-201ENSMUST00000202304 475 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm44571-201ENSMUST00000208092 533 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trub1Q8C0D0 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Smc5-206ENSMUST00000226111 3265 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Mir711-201ENSMUST00000102188 82 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm7688-201ENSMUST00000212857 337 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm18705-201ENSMUST00000215985 913 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm23508-201ENSMUST00000083079 72 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms