Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm16588-201ENSMUST00000162889 355 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm16558-201ENSMUST00000163015 532 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm17061-201ENSMUST00000163167 499 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm23617-201ENSMUST00000175410 95 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm29376-201ENSMUST00000189357 835 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm43005-201ENSMUST00000199015 648 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm42857-201ENSMUST00000200823 339 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm43895-201ENSMUST00000203219 855 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 AC164295.2-201ENSMUST00000228539 757 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm37598-201ENSMUST00000194506 1301 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm13579-201ENSMUST00000118519 517 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm7079-201ENSMUST00000119726 171 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm15030-201ENSMUST00000119804 484 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm15840-201ENSMUST00000122099 943 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm11197-201ENSMUST00000145158 839 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm17511-201ENSMUST00000172206 342 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm8826-201ENSMUST00000193161 948 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm42926-201ENSMUST00000200496 697 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm3257-201ENSMUST00000207217 675 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm22287-201ENSMUST00000083197 107 ntBASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp40Q8BWR4 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm25422-201ENSMUST00000104219 129 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm23750-201ENSMUST00000104222 132 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm23987-201ENSMUST00000117039 129 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm15048-201ENSMUST00000118201 954 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm8595-201ENSMUST00000118250 630 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm13887-201ENSMUST00000119009 344 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm26086-201ENSMUST00000157902 263 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm25332-201ENSMUST00000158038 105 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm23059-201ENSMUST00000158978 107 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm29284-201ENSMUST00000188363 255 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm37716-201ENSMUST00000193553 947 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms