Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm11366-201ENSMUST00000119279 429 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm13367-201ENSMUST00000119955 796 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm24363-201ENSMUST00000158440 311 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm9499-201ENSMUST00000180888 964 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Mir7056-201ENSMUST00000183776 59 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup98Q6PFD9 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm22266-201ENSMUST00000104011 138 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm11699-201ENSMUST00000119016 401 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm15171-201ENSMUST00000122191 334 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm22804-201ENSMUST00000158052 101 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm24217-201ENSMUST00000158260 133 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Olfr331-202ENSMUST00000170501 957 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm8941-201ENSMUST00000181451 899 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm27781-201ENSMUST00000185185 92 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm45870-201ENSMUST00000211269 601 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.3□□□□□ -1.4
Nup98Q6PFD9 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm16128-201ENSMUST00000117855 626 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm11447-201ENSMUST00000118983 858 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup98Q6PFD9 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm28097-201ENSMUST00000187333 366 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm37884-201ENSMUST00000191857 818 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm44214-201ENSMUST00000204153 606 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.29□□□□□ -1.4
Nup98Q6PFD9 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms