Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.26□□□□□ -1.41
Usp49Q6P9L4 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.26□□□□□ -1.41
Usp49Q6P9L4 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.26□□□□□ -1.41
Usp49Q6P9L4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp49Q6P9L4 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm12757-201ENSMUST00000119465 800 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm12768-201ENSMUST00000120055 759 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm15719-201ENSMUST00000120619 635 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm23250-201ENSMUST00000157444 267 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm2959-201ENSMUST00000169844 621 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Mir3572-201ENSMUST00000175549 86 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm27024-201ENSMUST00000182561 755 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm19174-201ENSMUST00000216944 956 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.25□□□□□ -1.41
Usp49Q6P9L4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm42535-201ENSMUST00000197312 1399 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm14836-201ENSMUST00000118567 471 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm14472-201ENSMUST00000119815 282 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm14732-201ENSMUST00000121372 545 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm22160-201ENSMUST00000158405 328 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm23408-201ENSMUST00000158523 265 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm3170-201ENSMUST00000168753 850 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm3348-201ENSMUST00000177813 850 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm27006-201ENSMUST00000182218 943 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm8641-201ENSMUST00000186995 826 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm3489-201ENSMUST00000190083 528 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm28640-201ENSMUST00000190918 550 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm45870-201ENSMUST00000211269 601 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm45696-201ENSMUST00000212088 985 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms