Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm18422-202ENSMUST00000203798 2214 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm15216-201ENSMUST00000118058 277 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm12438-201ENSMUST00000122034 336 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Mir496b-201ENSMUST00000184935 113 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm18448-201ENSMUST00000186286 599 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm19147-201ENSMUST00000199622 652 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm44239-201ENSMUST00000204228 271 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 CT030030.1-201ENSMUST00000218809 152 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 AC154600.1-201ENSMUST00000226480 714 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm10062-201ENSMUST00000072180 1470 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm45635-201ENSMUST00000211516 2134 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm44194-201ENSMUST00000204222 3229 ntBASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trim41Q5NCC3 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm14620-201ENSMUST00000120656 383 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm12618-201ENSMUST00000121754 483 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm13409-201ENSMUST00000122072 546 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm23977-201ENSMUST00000177871 74 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm37193-201ENSMUST00000193087 513 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm32175-201ENSMUST00000193641 346 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm29784-201ENSMUST00000196217 406 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm42673-201ENSMUST00000202676 337 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm17987-201ENSMUST00000206902 603 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Mir196a-1-201ENSMUST00000083612 102 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim41Q5NCC3 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm12242-201ENSMUST00000118824 738 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm14352-201ENSMUST00000119250 449 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm16331-201ENSMUST00000144274 498 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm26173-201ENSMUST00000158416 136 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Mir3110-201ENSMUST00000175053 80 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms