Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Rfx1P48377 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Rfx1P48377 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.58□□□□□ -1.2
Rfx1P48377 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.57□□□□□ -1.2
Rfx1P48377 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm2987-201ENSMUST00000187673 1693 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm12131-201ENSMUST00000117479 359 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm8624-201ENSMUST00000118083 432 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm12713-201ENSMUST00000118404 764 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm15349-201ENSMUST00000121154 204 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm14353-201ENSMUST00000122200 869 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm3810-201ENSMUST00000122413 476 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm24498-201ENSMUST00000158445 102 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm17137-202ENSMUST00000165729 957 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm22702-201ENSMUST00000175372 69 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm27976-201ENSMUST00000183635 162 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm18849-201ENSMUST00000189861 560 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.57□□□□□ -1.2
Rfx1P48377 Gm3257-201ENSMUST00000207217 675 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.57□□□□□ -1.2
Rfx1P48377 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.57□□□□□ -1.2
Rfx1P48377 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 AC161426.1-201ENSMUST00000214137 286 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Gm18040-201ENSMUST00000217922 827 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 AC140930.4-201ENSMUST00000220750 150 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Rfx1P48377 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Mir325-201ENSMUST00000083491 98 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 AC122357.1-201ENSMUST00000221652 1515 ntBASIC7.57□□□□□ -1.2
Rfx1P48377 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Rfx1P48377 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Rfx1P48377 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Rfx1P48377 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Rfx1P48377 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.56□□□□□ -1.2
Rfx1P48377 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm13357-201ENSMUST00000120528 537 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm11925-201ENSMUST00000121375 535 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Rfx1P48377 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm27006-201ENSMUST00000182218 943 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm27360-201ENSMUST00000183487 80 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm27236-201ENSMUST00000184147 442 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm9632-201ENSMUST00000195934 643 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm4742-201ENSMUST00000200261 771 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gm4860-201ENSMUST00000200368 454 ntBASIC7.56□□□□□ -1.2
Rfx1P48377 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.56□□□□□ -1.2
Rfx1P48377 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms