Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm23211-201ENSMUST00000122717 308 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm24175-201ENSMUST00000158931 129 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm20530-201ENSMUST00000174261 254 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm37609-201ENSMUST00000191778 678 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm43516-201ENSMUST00000196891 322 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.13□□□□□ -1.59
Tnfsf4P43488 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm13013-201ENSMUST00000119087 523 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm15034-201ENSMUST00000120043 349 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm12267-201ENSMUST00000121609 761 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm23354-201ENSMUST00000158426 104 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm27266-201ENSMUST00000184521 123 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm19029-201ENSMUST00000189923 564 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm18587-201ENSMUST00000213736 841 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm23511-201ENSMUST00000083084 164 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.12□□□□□ -1.59
Tnfsf4P43488 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.12□□□□□ -1.59
Tnfsf4P43488 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.11□□□□□ -1.59
Tnfsf4P43488 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm26144-201ENSMUST00000104475 132 ntBASIC5.11□□□□□ -1.59
Tnfsf4P43488 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm14563-201ENSMUST00000120571 354 ntBASIC5.11□□□□□ -1.59
Tnfsf4P43488 Mir1900-201ENSMUST00000122714 78 ntBASIC5.11□□□□□ -1.59
Tnfsf4P43488 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm12833-201ENSMUST00000136112 477 ntBASIC5.11□□□□□ -1.59
Tnfsf4P43488 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.11□□□□□ -1.59
Tnfsf4P43488 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms