Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm24935-201ENSMUST00000103770 110 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm24792-201ENSMUST00000104286 128 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm12850-201ENSMUST00000119210 436 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm26170-201ENSMUST00000158419 148 ntBASIC5.52□□□□□ -1.53
HttP42859 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Gm45539-201ENSMUST00000210313 428 ntBASIC5.52□□□□□ -1.53
HttP42859 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.52□□□□□ -1.53
HttP42859 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
HttP42859 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.52□□□□□ -1.53
HttP42859 Gm25348-201ENSMUST00000158961 111 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm23816-201ENSMUST00000179617 132 ntBASIC5.52□□□□□ -1.53
HttP42859 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.52□□□□□ -1.53
HttP42859 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.52□□□□□ -1.53
HttP42859 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.52□□□□□ -1.53
HttP42859 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.52□□□□□ -1.53
HttP42859 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Gm16478-201ENSMUST00000208113 5084 ntBASIC5.52□□□□□ -1.53
HttP42859 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HttP42859 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.51□□□□□ -1.53
HttP42859 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.51□□□□□ -1.53
HttP42859 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.51□□□□□ -1.53
HttP42859 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.51□□□□□ -1.53
HttP42859 Gm23673-201ENSMUST00000157474 298 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm23082-201ENSMUST00000157852 133 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm29479-201ENSMUST00000190352 455 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm5285-201ENSMUST00000193089 666 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HttP42859 Gm6104-201ENSMUST00000078030 603 ntBASIC5.51□□□□□ -1.53
HttP42859 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.51□□□□□ -1.53
HttP42859 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.51□□□□□ -1.53
HttP42859 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HttP42859 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC5.51□□□□□ -1.53
HttP42859 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HttP42859 Gm15752-201ENSMUST00000117427 394 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm12897-201ENSMUST00000120341 250 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm11584-201ENSMUST00000120636 325 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.51□□□□□ -1.53
HttP42859 Gm28654-201ENSMUST00000189801 379 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm29138-201ENSMUST00000191444 348 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm37828-201ENSMUST00000192496 432 ntBASIC5.51□□□□□ -1.53
HttP42859 Gm43136-201ENSMUST00000200403 636 ntBASIC5.51□□□□□ -1.53
HttP42859 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HttP42859 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HttP42859 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC5.51□□□□□ -1.53
HttP42859 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.51□□□□□ -1.53
HttP42859 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HttP42859 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms