Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Traf1P39428 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.55□□□□□ -1.36
Traf1P39428 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Traf1P39428 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Traf1P39428 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.55□□□□□ -1.36
Traf1P39428 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Traf1P39428 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Traf1P39428 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Traf1P39428 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.55□□□□□ -1.36
Traf1P39428 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Traf1P39428 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Traf1P39428 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Traf1P39428 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Traf1P39428 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.54□□□□□ -1.36
Traf1P39428 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Gm6134-201ENSMUST00000117265 171 ntBASIC6.54□□□□□ -1.36
Traf1P39428 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Gm12267-201ENSMUST00000121609 761 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.54□□□□□ -1.36
Traf1P39428 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm29161-201ENSMUST00000188250 699 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm28507-201ENSMUST00000189737 703 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm42522-201ENSMUST00000196071 255 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm43044-201ENSMUST00000198091 379 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm43148-201ENSMUST00000198237 520 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.54□□□□□ -1.36
Traf1P39428 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.54□□□□□ -1.36
Traf1P39428 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.54□□□□□ -1.36
Traf1P39428 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.54□□□□□ -1.36
Traf1P39428 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.54□□□□□ -1.36
Traf1P39428 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Traf1P39428 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm23686-201ENSMUST00000083241 164 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm25099-201ENSMUST00000093716 116 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.54□□□□□ -1.36
Traf1P39428 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Traf1P39428 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.54□□□□□ -1.36
Traf1P39428 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Traf1P39428 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Traf1P39428 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Traf1P39428 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Traf1P39428 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Gm24541-201ENSMUST00000103871 96 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Gm25422-201ENSMUST00000104219 129 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Traf1P39428 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Gm14836-201ENSMUST00000118567 471 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Gm23279-201ENSMUST00000157912 97 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Mir3080-201ENSMUST00000175010 79 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.53□□□□□ -1.36
Traf1P39428 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Gm6543-201ENSMUST00000197353 808 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Gm22897-202ENSMUST00000197782 127 ntBASIC6.53□□□□□ -1.36
Traf1P39428 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.53□□□□□ -1.36
Traf1P39428 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Traf1P39428 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Traf1P39428 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.53□□□□□ -1.36
Traf1P39428 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Traf1P39428 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.53□□□□□ -1.36
Traf1P39428 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Traf1P39428 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.53□□□□□ -1.36
Traf1P39428 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Traf1P39428 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
Traf1P39428 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Traf1P39428 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Traf1P39428 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Traf1P39428 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms