Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm25313-201ENSMUST00000101817 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm11910-201ENSMUST00000121624 432 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm16411-201ENSMUST00000122164 1100 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm8061-201ENSMUST00000122380 350 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm23429-201ENSMUST00000122486 149 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm14349-201ENSMUST00000137155 902 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm23287-201ENSMUST00000179427 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Gm23143-201ENSMUST00000180137 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm8614-201ENSMUST00000182528 978 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.97□□□□□ -1.45
LdlrP35951 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Gm29111-201ENSMUST00000188823 696 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm28584-201ENSMUST00000191489 696 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm37430-201ENSMUST00000193039 196 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm38138-201ENSMUST00000193274 696 ntBASIC5.97□□□□□ -1.45
LdlrP35951 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.97□□□□□ -1.45
LdlrP35951 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm18160-201ENSMUST00000214279 827 ntBASIC5.97□□□□□ -1.45
LdlrP35951 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.97□□□□□ -1.45
LdlrP35951 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.97□□□□□ -1.45
LdlrP35951 CT009550.5-201ENSMUST00000226286 382 ntBASIC5.97□□□□□ -1.45
LdlrP35951 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm25135-201ENSMUST00000082648 143 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm24871-201ENSMUST00000083099 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm25099-201ENSMUST00000093716 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LdlrP35951 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LdlrP35951 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
LdlrP35951 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.97□□□□□ -1.45
LdlrP35951 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.97□□□□□ -1.45
LdlrP35951 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.97□□□□□ -1.45
LdlrP35951 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.96□□□□□ -1.45
LdlrP35951 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.45
LdlrP35951 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.96□□□□□ -1.45
LdlrP35951 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
LdlrP35951 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LdlrP35951 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LdlrP35951 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.96□□□□□ -1.46
LdlrP35951 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LdlrP35951 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LdlrP35951 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LdlrP35951 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LdlrP35951 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LdlrP35951 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LdlrP35951 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LdlrP35951 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LdlrP35951 Gm12565-201ENSMUST00000119004 649 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms