Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.74□□□□□ -1.49
BdnfP21237 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BdnfP21237 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.74□□□□□ -1.49
BdnfP21237 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BdnfP21237 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BdnfP21237 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.74□□□□□ -1.49
BdnfP21237 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm12231-201ENSMUST00000119447 695 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm15267-201ENSMUST00000120888 464 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm11797-201ENSMUST00000121336 754 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm15696-201ENSMUST00000121730 445 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm15877-201ENSMUST00000121897 964 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.73□□□□□ -1.49
BdnfP21237 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm25271-201ENSMUST00000157273 290 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm26162-201ENSMUST00000157793 132 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm6541-201ENSMUST00000165542 561 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm6673-201ENSMUST00000166114 700 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm17060-201ENSMUST00000172394 824 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.73□□□□□ -1.49
BdnfP21237 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm29556-201ENSMUST00000187591 696 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm38283-201ENSMUST00000193041 695 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm43743-202ENSMUST00000198353 491 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm18039-201ENSMUST00000217816 728 ntBASIC5.73□□□□□ -1.49
BdnfP21237 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.73□□□□□ -1.49
BdnfP21237 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.73□□□□□ -1.49
BdnfP21237 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.73□□□□□ -1.49
BdnfP21237 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.73□□□□□ -1.49
BdnfP21237 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.73□□□□□ -1.49
BdnfP21237 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BdnfP21237 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
BdnfP21237 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.73□□□□□ -1.49
BdnfP21237 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.73□□□□□ -1.49
BdnfP21237 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
BdnfP21237 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BdnfP21237 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BdnfP21237 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BdnfP21237 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
BdnfP21237 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BdnfP21237 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BdnfP21237 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BdnfP21237 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.72□□□□□ -1.49
BdnfP21237 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
BdnfP21237 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BdnfP21237 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.72□□□□□ -1.49
BdnfP21237 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.72□□□□□ -1.49
BdnfP21237 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
BdnfP21237 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BdnfP21237 Gm25346-201ENSMUST00000104509 128 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms