Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
P20040 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
P20040 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
P20040 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.89□□□□□ -1.63
P20040 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
P20040 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
P20040 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
P20040 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.88□□□□□ -1.63
P20040 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
P20040 Gm37686-201ENSMUST00000194099 2309 ntBASIC4.88□□□□□ -1.63
P20040 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Gm14106-201ENSMUST00000119382 438 ntBASIC4.88□□□□□ -1.63
P20040 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.88□□□□□ -1.63
P20040 Gm15194-201ENSMUST00000120453 434 ntBASIC4.88□□□□□ -1.63
P20040 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
P20040 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.88□□□□□ -1.63
P20040 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Gm25227-201ENSMUST00000158204 112 ntBASIC4.88□□□□□ -1.63
P20040 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.88□□□□□ -1.63
P20040 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC4.88□□□□□ -1.63
P20040 Mir3097-201ENSMUST00000175356 67 ntBASIC4.88□□□□□ -1.63
P20040 Gm27854-201ENSMUST00000175578 244 ntBASIC4.88□□□□□ -1.63
P20040 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.88□□□□□ -1.63
P20040 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P20040 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
P20040 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P20040 Gm27679-201ENSMUST00000184612 84 ntBASIC4.88□□□□□ -1.63
P20040 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.88□□□□□ -1.63
P20040 Gm43382-201ENSMUST00000198954 838 ntBASIC4.88□□□□□ -1.63
P20040 Gm43895-201ENSMUST00000203219 855 ntBASIC4.88□□□□□ -1.63
P20040 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.88□□□□□ -1.63
P20040 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.88□□□□□ -1.63
P20040 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 CT030170.4-202ENSMUST00000221109 540 ntBASIC4.88□□□□□ -1.63
P20040 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.88□□□□□ -1.63
P20040 AC123061.2-201ENSMUST00000226234 802 ntBASIC4.88□□□□□ -1.63
P20040 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
P20040 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P20040 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P20040 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P20040 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.88□□□□□ -1.63
P20040 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P20040 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.87□□□□□ -1.63
P20040 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P20040 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.87□□□□□ -1.63
P20040 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
P20040 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.87□□□□□ -1.63
P20040 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.87□□□□□ -1.63
P20040 Gm14930-201ENSMUST00000118864 652 ntBASIC4.87□□□□□ -1.63
P20040 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P20040 Gm12732-201ENSMUST00000121688 180 ntBASIC4.87□□□□□ -1.63
P20040 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Gm23229-201ENSMUST00000157297 105 ntBASIC4.87□□□□□ -1.63
P20040 Gm26372-201ENSMUST00000157831 236 ntBASIC4.87□□□□□ -1.63
P20040 Gm23224-201ENSMUST00000158122 271 ntBASIC4.87□□□□□ -1.63
P20040 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Gm8419-201ENSMUST00000189886 412 ntBASIC4.87□□□□□ -1.63
P20040 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.87□□□□□ -1.63
P20040 Gm31306-201ENSMUST00000197517 508 ntBASIC4.87□□□□□ -1.63
P20040 Gm43148-201ENSMUST00000198237 520 ntBASIC4.87□□□□□ -1.63
P20040 Gm34149-201ENSMUST00000203547 304 ntBASIC4.87□□□□□ -1.63
P20040 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.87□□□□□ -1.63
P20040 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.87□□□□□ -1.63
P20040 Gm3912-203ENSMUST00000211024 367 ntBASIC4.87□□□□□ -1.63
P20040 Gm10709-201ENSMUST00000213318 480 ntBASIC4.87□□□□□ -1.63
P20040 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.87□□□□□ -1.63
P20040 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P20040 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.87□□□□□ -1.63
P20040 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 AC154417.1-201ENSMUST00000223876 476 ntBASIC4.87□□□□□ -1.63
P20040 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.87□□□□□ -1.63
P20040 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms