Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm4152-201ENSMUST00000172675 259 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Mir1264-201ENSMUST00000175381 86 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hcn3O88705 Gm27998-201ENSMUST00000184902 361 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.63□□□□□ -1.51
Hcn3O88705 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.63□□□□□ -1.51
Hcn3O88705 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm31532-201ENSMUST00000203555 767 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm44163-201ENSMUST00000205140 475 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.63□□□□□ -1.51
Hcn3O88705 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Gm18205-201ENSMUST00000209215 841 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm18705-201ENSMUST00000215985 913 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm19181-201ENSMUST00000218891 940 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Gm32526-201ENSMUST00000221878 981 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Hcn3O88705 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hcn3O88705 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hcn3O88705 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Hcn3O88705 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.63□□□□□ -1.51
Hcn3O88705 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.63□□□□□ -1.51
Hcn3O88705 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.63□□□□□ -1.51
Hcn3O88705 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hcn3O88705 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.63□□□□□ -1.51
Hcn3O88705 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Hcn3O88705 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm12327-201ENSMUST00000121729 1168 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm13669-201ENSMUST00000122366 457 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm12998-201ENSMUST00000122445 789 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Snora81-201ENSMUST00000157310 178 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm16102-201ENSMUST00000160955 420 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hcn3O88705 Mirt2-201ENSMUST00000175179 285 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Vis1-201ENSMUST00000183957 201 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm28917-201ENSMUST00000187294 237 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm28766-201ENSMUST00000191086 234 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm43345-201ENSMUST00000199484 269 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Trav12-4-201ENSMUST00000200663 271 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm43772-201ENSMUST00000202052 379 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm45473-201ENSMUST00000211452 616 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm18103-201ENSMUST00000216621 779 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm5649-201ENSMUST00000217918 951 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm8672-201ENSMUST00000221200 332 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm11360-201ENSMUST00000221898 262 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm18955-201ENSMUST00000223173 649 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm5229-201ENSMUST00000039375 354 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hcn3O88705 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hcn3O88705 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hcn3O88705 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.62□□□□□ -1.51
Hcn3O88705 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hcn3O88705 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms