Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm18996-201ENSMUST00000214851 755 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm18413-201ENSMUST00000221573 655 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 AC154633.1-201ENSMUST00000223276 449 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm14756-201ENSMUST00000116395 240 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm25227-201ENSMUST00000158204 112 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm42428-201ENSMUST00000198677 302 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm18482-201ENSMUST00000202405 760 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm44307-201ENSMUST00000204466 764 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm19033-201ENSMUST00000208516 964 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 AC154219.1-201ENSMUST00000220764 1262 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm37092-201ENSMUST00000193381 1518 ntBASIC4.36□□□□□ -1.71
Hmgb3O54879 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hmgb3O54879 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm13739-201ENSMUST00000118020 530 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm14874-201ENSMUST00000118995 438 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.35□□□□□ -1.71
Hmgb3O54879 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm12504-202ENSMUST00000148026 306 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm3650-201ENSMUST00000180600 747 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm27219-201ENSMUST00000184633 742 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm18177-201ENSMUST00000188373 404 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm4856-201ENSMUST00000192696 1091 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Ighv1-14-201ENSMUST00000194015 402 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm44412-201ENSMUST00000203018 294 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm44277-201ENSMUST00000205128 649 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm20997-201ENSMUST00000205148 231 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm18592-201ENSMUST00000221529 276 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm36262-201ENSMUST00000223274 499 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Hmgb3O54879 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.35□□□□□ -1.71
Hmgb3O54879 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hmgb3O54879 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms