Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm38360-201ENSMUST00000195130 454 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm37385-201ENSMUST00000195223 387 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm43798-201ENSMUST00000202056 394 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm44162-201ENSMUST00000203543 544 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm45359-201ENSMUST00000210635 427 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm45750-201ENSMUST00000211966 354 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
H2afb2S4R1M3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm12131-201ENSMUST00000117479 359 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm12813-201ENSMUST00000119615 902 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm8430-201ENSMUST00000119780 471 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm11278-201ENSMUST00000121002 997 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm12413-201ENSMUST00000121508 312 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm9428-201ENSMUST00000127214 769 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm16260-201ENSMUST00000155141 304 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm16557-201ENSMUST00000159182 191 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm17511-201ENSMUST00000172206 342 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm23617-201ENSMUST00000175410 95 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm27037-201ENSMUST00000182270 960 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm28188-201ENSMUST00000190483 236 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm34768-201ENSMUST00000193884 565 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm34149-201ENSMUST00000203547 304 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm3257-201ENSMUST00000207217 675 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb2S4R1M3 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Gm23511-201ENSMUST00000083084 164 ntBASIC5.4□□□□□ -1.54
H2afb2S4R1M3 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.4□□□□□ -1.55
H2afb2S4R1M3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
H2afb2S4R1M3 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm13311-201ENSMUST00000117863 379 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm13681-201ENSMUST00000117925 210 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm14563-201ENSMUST00000120571 354 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm12583-201ENSMUST00000120677 853 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm25430-201ENSMUST00000157614 289 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.39□□□□□ -1.55
H2afb2S4R1M3 Gm27781-201ENSMUST00000185185 92 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms