Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm12683-201ENSMUST00000117528 415 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm2199-201ENSMUST00000119065 874 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm14106-201ENSMUST00000119382 438 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm22116-201ENSMUST00000158791 141 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm27679-201ENSMUST00000184612 84 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm45750-201ENSMUST00000211966 354 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm32526-201ENSMUST00000221878 981 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm16335-201ENSMUST00000077495 309 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm22370-201ENSMUST00000102422 83 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm13866-201ENSMUST00000118901 968 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm14267-201ENSMUST00000119751 496 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm11484-201ENSMUST00000119808 338 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm16423-201ENSMUST00000120078 947 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm14831-201ENSMUST00000120253 409 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm26169-201ENSMUST00000158420 135 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm25363-201ENSMUST00000158850 245 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm16125-201ENSMUST00000159003 339 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm27960-201ENSMUST00000183445 184 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm27160-201ENSMUST00000184837 199 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm8419-201ENSMUST00000189886 412 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm28640-201ENSMUST00000190918 550 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm43148-201ENSMUST00000198237 520 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Gm44431-201ENSMUST00000203500 413 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim3Q9R1R2 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms