Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm24186-201ENSMUST00000157983 127 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm23408-201ENSMUST00000158523 265 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm20530-201ENSMUST00000174261 254 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm6472-201ENSMUST00000178147 651 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm24957-201ENSMUST00000179604 132 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm8941-201ENSMUST00000181451 899 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm19880-201ENSMUST00000207731 318 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lima1Q9ERG0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm26350-201ENSMUST00000157531 288 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm22724-201ENSMUST00000158091 127 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm22636-201ENSMUST00000158142 275 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm25246-201ENSMUST00000175476 69 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm29474-201ENSMUST00000187688 379 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm2040-201ENSMUST00000202979 289 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm46223-201ENSMUST00000215196 675 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Mir143-201ENSMUST00000083511 63 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.33□□□□□ -1.56
Lima1Q9ERG0 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm15034-201ENSMUST00000120043 349 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm8545-201ENSMUST00000120692 801 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm15152-201ENSMUST00000121540 394 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm11200-201ENSMUST00000121698 448 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm23280-201ENSMUST00000157905 139 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm18343-201ENSMUST00000172802 604 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm22690-201ENSMUST00000175054 110 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Mir6244-201ENSMUST00000184156 117 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm37609-201ENSMUST00000191778 678 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 169.1 ms