Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm25489-201ENSMUST00000158727 141 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Scarna10-201ENSMUST00000158992 325 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Mir5112-201ENSMUST00000174897 60 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm18444-201ENSMUST00000191239 629 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm38015-201ENSMUST00000193048 188 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm44494-201ENSMUST00000196760 129 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm45722-201ENSMUST00000213075 466 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm5229-201ENSMUST00000039375 354 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm23737-201ENSMUST00000082547 159 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Mir337-201ENSMUST00000083592 97 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.4
Smc1aQ9CU62 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Smc1aQ9CU62 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm22592-201ENSMUST00000104242 131 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm14610-201ENSMUST00000118358 966 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm11447-201ENSMUST00000118983 858 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm14065-201ENSMUST00000120848 585 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm24477-201ENSMUST00000157438 103 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm22596-201ENSMUST00000157601 316 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm15970-201ENSMUST00000160623 834 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm27887-201ENSMUST00000184367 102 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm36994-201ENSMUST00000192941 492 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm44432-201ENSMUST00000203342 938 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm44431-201ENSMUST00000203500 413 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm6702-201ENSMUST00000208496 471 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm8137-201ENSMUST00000218997 463 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Mir133b-201ENSMUST00000083546 119 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Smc1aQ9CU62 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm22160-201ENSMUST00000158405 328 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm22116-201ENSMUST00000158791 141 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm29356-201ENSMUST00000186935 373 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Gm45596-201ENSMUST00000209279 434 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Smc1aQ9CU62 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms