Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.19□□□□□ -1.58
Use1Q9CQ56 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm5830-201ENSMUST00000049117 443 ntBASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm25515-201ENSMUST00000083858 157 ntBASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.19□□□□□ -1.58
Use1Q9CQ56 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.19□□□□□ -1.58
Use1Q9CQ56 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm23739-201ENSMUST00000102295 108 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm11105-201ENSMUST00000112781 478 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm12131-201ENSMUST00000117479 359 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm12683-201ENSMUST00000117528 415 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm15618-201ENSMUST00000121610 452 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm8185-201ENSMUST00000160999 669 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm21772-201ENSMUST00000169213 478 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm17126-201ENSMUST00000172276 523 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm19560-201ENSMUST00000177510 514 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm24303-201ENSMUST00000178237 126 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm29474-201ENSMUST00000187688 379 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm9127-201ENSMUST00000188041 985 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm29201-201ENSMUST00000189120 431 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm37177-201ENSMUST00000193768 417 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm38360-201ENSMUST00000195130 454 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm43629-201ENSMUST00000201782 704 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm4587-201ENSMUST00000209135 637 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm45525-201ENSMUST00000210800 389 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.18□□□□□ -1.58
Use1Q9CQ56 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Use1Q9CQ56 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms