Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm18833-201ENSMUST00000173218 862 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm21909-201ENSMUST00000178260 439 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm18447-201ENSMUST00000187501 307 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm37871-201ENSMUST00000194973 688 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Trav3-2-201ENSMUST00000198999 305 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm9367-201ENSMUST00000205703 546 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm45246-201ENSMUST00000210820 367 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm18226-201ENSMUST00000215261 521 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC154426.1-201ENSMUST00000225614 1132 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC153881.3-201ENSMUST00000218494 1561 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm19074-201ENSMUST00000218915 1429 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Defa-ps1-201ENSMUST00000119062 282 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm13711-201ENSMUST00000119708 453 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm11504-201ENSMUST00000120211 173 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Defa-ps6-201ENSMUST00000122172 282 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm16362-201ENSMUST00000135189 214 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm25435-201ENSMUST00000158277 267 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm22945-201ENSMUST00000158557 157 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm17137-202ENSMUST00000165729 957 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm2855-201ENSMUST00000166765 456 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm3549-201ENSMUST00000203873 794 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm44896-201ENSMUST00000206190 772 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm5324-201ENSMUST00000208115 476 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 AC122301.1-201ENSMUST00000219625 507 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim11Q99PQ2 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms