Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm18447-201ENSMUST00000187501 307 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm7019-201ENSMUST00000194122 369 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm20128-201ENSMUST00000196189 417 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm43576-201ENSMUST00000197937 871 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm43708-201ENSMUST00000198857 961 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Clec2j-202ENSMUST00000203658 606 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm8319-201ENSMUST00000205708 641 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm26072-201ENSMUST00000083135 107 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm29486-201ENSMUST00000088648 372 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm37488-201ENSMUST00000195434 3374 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm11781-201ENSMUST00000118328 472 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm12713-201ENSMUST00000118404 764 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm4992-201ENSMUST00000120256 768 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm12041-201ENSMUST00000121606 602 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm14847-201ENSMUST00000121978 519 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm23553-201ENSMUST00000157817 295 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm23819-201ENSMUST00000158744 109 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm16298-201ENSMUST00000161107 420 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm17895-201ENSMUST00000194028 874 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm37989-201ENSMUST00000195202 803 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm6070-201ENSMUST00000207275 419 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm7351-201ENSMUST00000210745 580 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.04□□□□□ -1.44
Trim8Q99PJ2 AC116465.1-201ENSMUST00000220324 235 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms