Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm9429-201ENSMUST00000117804 868 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm9432-201ENSMUST00000117810 759 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Snora47-201ENSMUST00000157483 138 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm29513-201ENSMUST00000185741 202 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm37203-201ENSMUST00000191618 385 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm8861-201ENSMUST00000196346 832 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm44382-201ENSMUST00000198683 122 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm18039-201ENSMUST00000217816 728 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm25739-201ENSMUST00000082886 107 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.01□□□□□ -1.45
CopaQ8CIE6 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CopaQ8CIE6 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm38137-201ENSMUST00000193735 1401 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CopaQ8CIE6 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm13870-201ENSMUST00000117214 1023 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm2288-201ENSMUST00000118560 638 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm12978-201ENSMUST00000121250 522 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm3715-201ENSMUST00000172308 617 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CopaQ8CIE6 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6□□□□□ -1.45
CopaQ8CIE6 Mir6992-201ENSMUST00000183342 109 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Mir6398-201ENSMUST00000184541 102 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm37187-201ENSMUST00000193425 341 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm44392-201ENSMUST00000196758 115 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm42461-201ENSMUST00000198627 1150 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6□□□□□ -1.45
CopaQ8CIE6 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6□□□□□ -1.45
CopaQ8CIE6 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6□□□□□ -1.45
CopaQ8CIE6 AC154595.2-201ENSMUST00000225067 310 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 AC140209.1-201ENSMUST00000227875 284 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 AC164295.2-201ENSMUST00000228539 757 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 AC163664.2-201ENSMUST00000228894 459 ntBASIC6□□□□□ -1.45
CopaQ8CIE6 BC023105-201ENSMUST00000073997 1227 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms