Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm11774-201ENSMUST00000118601 293 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm6175-201ENSMUST00000121351 400 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm11910-201ENSMUST00000121624 432 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Mir1903-201ENSMUST00000122574 80 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm24854-201ENSMUST00000158025 98 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm24731-201ENSMUST00000158227 131 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm24343-201ENSMUST00000158708 111 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm26970-201ENSMUST00000182990 964 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Mir7072-201ENSMUST00000184542 60 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm29640-201ENSMUST00000187972 278 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm4742-201ENSMUST00000200261 771 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm18789-201ENSMUST00000216115 550 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Mir350-201ENSMUST00000083639 99 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm12850-201ENSMUST00000119210 436 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm7079-201ENSMUST00000119726 171 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm13991-201ENSMUST00000120190 648 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm12222-201ENSMUST00000121368 260 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm15959-201ENSMUST00000121724 368 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm27855-201ENSMUST00000184122 128 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm28466-201ENSMUST00000190678 659 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm38214-201ENSMUST00000192581 988 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm37993-201ENSMUST00000195301 988 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm43922-201ENSMUST00000205071 328 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm45405-201ENSMUST00000211544 609 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm18601-201ENSMUST00000220831 634 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm17165-201ENSMUST00000096155 493 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brf1Q8CFK2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Brf1Q8CFK2 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Brf1Q8CFK2 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Brf1Q8CFK2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms