Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm24265-201ENSMUST00000101833 141 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm13681-201ENSMUST00000117925 210 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm14837-201ENSMUST00000119688 206 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm4234-201ENSMUST00000119747 714 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm24532-201ENSMUST00000157951 286 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm24940-201ENSMUST00000158326 108 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm20453-201ENSMUST00000173968 226 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm22122-201ENSMUST00000175147 200 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm24407-201ENSMUST00000177864 141 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm31306-201ENSMUST00000197517 508 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm43992-201ENSMUST00000204358 197 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm45082-201ENSMUST00000206082 601 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm45548-201ENSMUST00000210076 3167 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm11358-201ENSMUST00000122310 373 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm7838-201ENSMUST00000203221 1189 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm45551-201ENSMUST00000211459 928 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm7119-201ENSMUST00000221345 695 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm7768-201ENSMUST00000222988 597 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 AC164315.1-201ENSMUST00000226452 708 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 AC154738.7-201ENSMUST00000228606 579 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Gm15500-201ENSMUST00000071523 894 ntBASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp40Q8BWR4 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp40Q8BWR4 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp40Q8BWR4 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.9□□□□□ -1.15
Usp40Q8BWR4 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 AC112142.1-203ENSMUST00000228670 2472 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm13806-201ENSMUST00000117822 325 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm14871-201ENSMUST00000119056 194 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm15490-201ENSMUST00000119894 387 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm12706-201ENSMUST00000121588 698 ntBASIC7.89□□□□□ -1.15
Usp40Q8BWR4 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp40Q8BWR4 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms