Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.77□□□□□ -1.33
Shank3Q4ACU6 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shank3Q4ACU6 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Shank3Q4ACU6 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.77□□□□□ -1.33
Shank3Q4ACU6 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shank3Q4ACU6 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm22204-201ENSMUST00000122654 327 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm16254-201ENSMUST00000131528 730 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm8221-201ENSMUST00000178052 564 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm2367-201ENSMUST00000192374 472 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm7040-201ENSMUST00000223271 443 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm11369-201ENSMUST00000120812 318 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm6047-201ENSMUST00000167221 574 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm37503-201ENSMUST00000192088 319 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Mir6516-201ENSMUST00000196236 110 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shank3Q4ACU6 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm45635-201ENSMUST00000211516 2134 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm6382-201ENSMUST00000118873 942 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm25278-201ENSMUST00000157267 120 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Shank3Q4ACU6 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Gm26153-201ENSMUST00000157433 127 ntBASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.74□□□□□ -1.33
Shank3Q4ACU6 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms