Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.6□□□□□ -1.19
Rfx1P48377 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm23527-201ENSMUST00000104570 130 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Rfx1P48377 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm12448-201ENSMUST00000118852 655 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm15311-201ENSMUST00000119682 282 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm15305-201ENSMUST00000120354 288 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm23792-201ENSMUST00000122557 93 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm26365-201ENSMUST00000179177 94 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC7.59□□□□□ -1.19
Rfx1P48377 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Rfx1P48377 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm18406-201ENSMUST00000185872 669 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm19224-201ENSMUST00000190477 793 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm37103-201ENSMUST00000191830 115 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm3933-201ENSMUST00000195391 439 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm17824-201ENSMUST00000197690 805 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm43884-201ENSMUST00000204251 559 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm19032-201ENSMUST00000208584 592 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Gm18414-201ENSMUST00000210858 694 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 AC137871.2-201ENSMUST00000226482 289 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Rfx1P48377 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Rfx1P48377 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm25189-201ENSMUST00000083911 164 ntBASIC7.59□□□□□ -1.19
Rfx1P48377 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC7.59□□□□□ -1.19
Rfx1P48377 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Rfx1P48377 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Rfx1P48377 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC7.59□□□□□ -1.2
Rfx1P48377 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Rfx1P48377 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm12442-201ENSMUST00000118372 338 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm15126-201ENSMUST00000118631 833 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm13508-201ENSMUST00000121639 775 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm14162-201ENSMUST00000121985 601 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm24517-201ENSMUST00000122560 107 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC7.58□□□□□ -1.2
Rfx1P48377 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm26046-201ENSMUST00000157312 166 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm23754-201ENSMUST00000157576 63 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm20637-201ENSMUST00000175715 462 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm29259-201ENSMUST00000186396 694 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm7452-201ENSMUST00000200764 788 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm44809-201ENSMUST00000208305 993 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Rfx1P48377 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 Gm18226-201ENSMUST00000215261 521 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 Gm17849-201ENSMUST00000219788 853 ntBASIC7.58□□□□□ -1.2
Rfx1P48377 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC7.58□□□□□ -1.2
Rfx1P48377 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms