Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm8480-201ENSMUST00000190350 698 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm44984-201ENSMUST00000207802 394 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm7688-201ENSMUST00000212857 337 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx2P43241 Mir342-201ENSMUST00000083502 99 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx2P43241 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx2P43241 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx2P43241 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
Cdx2P43241 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.3□□□□□ -1.56
Cdx2P43241 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx2P43241 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx2P43241 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx2P43241 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cdx2P43241 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Cdx2P43241 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm14620-201ENSMUST00000120656 383 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm13077-201ENSMUST00000121941 484 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm15840-201ENSMUST00000122099 943 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm25389-201ENSMUST00000157340 286 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm23279-201ENSMUST00000157912 97 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm15812-201ENSMUST00000162331 748 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm26595-201ENSMUST00000181585 484 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm37966-201ENSMUST00000193122 326 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm37882-201ENSMUST00000195254 196 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm17775-201ENSMUST00000198542 258 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm45215-201ENSMUST00000206407 395 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx2P43241 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Gm5457-201ENSMUST00000022260 333 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm4963-201ENSMUST00000072718 378 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdx2P43241 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdx2P43241 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.29□□□□□ -1.56
Cdx2P43241 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx2P43241 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx2P43241 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.28□□□□□ -1.56
Cdx2P43241 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Cdx2P43241 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdx2P43241 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdx2P43241 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx2P43241 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.28□□□□□ -1.56
Cdx2P43241 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.28□□□□□ -1.56
Cdx2P43241 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Cdx2P43241 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx2P43241 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx2P43241 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx2P43241 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx2P43241 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx2P43241 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx2P43241 Gm15171-201ENSMUST00000122191 334 ntBASIC5.28□□□□□ -1.56
Cdx2P43241 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms