Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm26983-201ENSMUST00000182051 388 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.66□□□□□ -1.5
Lire1P11260 Mir7653-201ENSMUST00000184358 61 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Mir6398-201ENSMUST00000184541 102 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm21524-201ENSMUST00000190499 696 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm43392-201ENSMUST00000196560 434 ntBASIC5.66□□□□□ -1.5
Lire1P11260 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.66□□□□□ -1.5
Lire1P11260 BC049739-201ENSMUST00000202626 660 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm44972-201ENSMUST00000206419 406 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm45200-201ENSMUST00000207434 919 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm7570-201ENSMUST00000215246 698 ntBASIC5.66□□□□□ -1.5
Lire1P11260 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm10095-201ENSMUST00000222765 483 ntBASIC5.66□□□□□ -1.5
Lire1P11260 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.66□□□□□ -1.5
Lire1P11260 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm5830-201ENSMUST00000049117 443 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm22971-201ENSMUST00000083305 97 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm24173-201ENSMUST00000104130 128 ntBASIC5.65□□□□□ -1.5
Lire1P11260 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Lire1P11260 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm12937-201ENSMUST00000118333 448 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm13604-201ENSMUST00000119332 482 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm15781-201ENSMUST00000120216 323 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm14300-201ENSMUST00000120800 946 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm13593-201ENSMUST00000121329 692 ntBASIC5.65□□□□□ -1.5
Lire1P11260 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm23995-201ENSMUST00000158060 129 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm3715-201ENSMUST00000172308 617 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm2058-201ENSMUST00000178791 560 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm9457-201ENSMUST00000180176 372 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm37430-201ENSMUST00000193039 196 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm3544-201ENSMUST00000196129 305 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lire1P11260 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Snora30-201ENSMUST00000083325 130 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Olfr467-201ENSMUST00000084756 927 ntBASIC5.65□□□□□ -1.5
Lire1P11260 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lire1P11260 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.65□□□□□ -1.5
Lire1P11260 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.65□□□□□ -1.5
Lire1P11260 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lire1P11260 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.65□□□□□ -1.51
Lire1P11260 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lire1P11260 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.65□□□□□ -1.51
Lire1P11260 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Lire1P11260 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Lire1P11260 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms