Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm25291-201ENSMUST00000122795 144 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm22916-201ENSMUST00000157616 119 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm24465-201ENSMUST00000178398 107 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm26970-201ENSMUST00000182990 964 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm37719-201ENSMUST00000194615 292 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm18702-201ENSMUST00000196923 588 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm2961-201ENSMUST00000211074 772 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm8672-201ENSMUST00000221200 332 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Mir546-201ENSMUST00000102105 121 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm14587-201ENSMUST00000121714 658 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm11679-201ENSMUST00000121830 779 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm26169-201ENSMUST00000158420 135 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3216-201ENSMUST00000166927 486 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3141-201ENSMUST00000168726 499 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm37072-201ENSMUST00000194570 837 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm43078-201ENSMUST00000197222 168 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm44132-201ENSMUST00000205142 151 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm44539-201ENSMUST00000206010 238 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm6850-201ENSMUST00000210031 530 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm45249-201ENSMUST00000211021 348 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm45733-201ENSMUST00000212988 437 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm18705-201ENSMUST00000215985 913 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Chmp6P0C0A3 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Chmp6P0C0A3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms