Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 AC154552.6-201ENSMUST00000221365 1342 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm11905-201ENSMUST00000117653 678 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm11256-201ENSMUST00000118109 829 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm12189-201ENSMUST00000119779 912 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm14054-201ENSMUST00000120744 704 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm14463-201ENSMUST00000121117 498 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm6977-201ENSMUST00000121568 512 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm13214-201ENSMUST00000122137 408 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm24002-201ENSMUST00000158456 104 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm24465-201ENSMUST00000178398 107 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm26557-201ENSMUST00000180756 493 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm28437-201ENSMUST00000190277 783 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm43550-201ENSMUST00000200597 303 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm7492-201ENSMUST00000201745 725 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm4374-201ENSMUST00000204929 424 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.32□□□□□ -1.56
H2afb3S4R1G7 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb3S4R1G7 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm12375-201ENSMUST00000119331 921 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm15181-201ENSMUST00000120142 177 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm7494-201ENSMUST00000121248 441 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm11472-201ENSMUST00000121305 556 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm11389-201ENSMUST00000121407 430 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm15152-201ENSMUST00000121540 394 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm15164-201ENSMUST00000122203 271 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Mir1945-201ENSMUST00000157919 78 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm24960-201ENSMUST00000157923 90 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm25713-201ENSMUST00000158625 109 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm18953-201ENSMUST00000175694 300 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm27025-201ENSMUST00000182392 942 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm26923-201ENSMUST00000182615 996 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm27315-201ENSMUST00000183977 154 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm27715-201ENSMUST00000184714 260 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm28688-201ENSMUST00000187301 268 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm18407-201ENSMUST00000192126 790 ntBASIC5.31□□□□□ -1.56
H2afb3S4R1G7 Gm37700-201ENSMUST00000192617 965 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms