Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm22372-201ENSMUST00000104589 136 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Mir292-201ENSMUST00000104847 82 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm23839-201ENSMUST00000116957 109 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm13473-201ENSMUST00000119289 367 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm8761-201ENSMUST00000121507 955 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm7309-201ENSMUST00000121670 581 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm8185-201ENSMUST00000160999 669 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm17223-201ENSMUST00000171413 481 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm22420-201ENSMUST00000178795 126 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm10410-201ENSMUST00000180138 384 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm26898-201ENSMUST00000181678 384 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm37024-201ENSMUST00000192224 868 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm18553-201ENSMUST00000194152 634 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm45845-201ENSMUST00000207326 582 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm22126-201ENSMUST00000083244 142 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lima1Q9ERG0 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm11774-201ENSMUST00000118601 293 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm6427-201ENSMUST00000118721 979 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm14620-201ENSMUST00000120656 383 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm11848-201ENSMUST00000121207 973 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm23430-201ENSMUST00000122490 314 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm24692-201ENSMUST00000157761 146 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm2539-203ENSMUST00000181352 746 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm27679-201ENSMUST00000184612 84 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm18799-201ENSMUST00000189104 913 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm29745-201ENSMUST00000198005 687 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Mir375-201ENSMUST00000083682 64 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lima1Q9ERG0 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm14772-201ENSMUST00000116562 514 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm11821-201ENSMUST00000117335 979 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm2199-201ENSMUST00000119065 874 ntBASIC5.34□□□□□ -1.55
Lima1Q9ERG0 Gm14106-201ENSMUST00000119382 438 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms