Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm43580-201ENSMUST00000202892 284 ntBASIC5.31□□□□□ -1.56
Cdh23Q99PF4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.31□□□□□ -1.56
Cdh23Q99PF4 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh23Q99PF4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm10552-201ENSMUST00000113396 372 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm15227-201ENSMUST00000121844 399 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm37495-201ENSMUST00000194590 264 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm7657-201ENSMUST00000118851 666 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm5842-201ENSMUST00000195073 622 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm43370-201ENSMUST00000196437 284 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm25592-201ENSMUST00000082635 131 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm14878-201ENSMUST00000118167 293 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm17081-201ENSMUST00000167363 478 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Mir6416-201ENSMUST00000183664 117 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdh23Q99PF4 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm14107-201ENSMUST00000117774 330 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Scarna10-201ENSMUST00000158992 325 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm6047-201ENSMUST00000167221 574 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms