Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm11105-201ENSMUST00000112781 478 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm11821-201ENSMUST00000117335 979 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm12985-201ENSMUST00000118376 183 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm16016-201ENSMUST00000120831 550 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm15335-201ENSMUST00000122442 411 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm22492-201ENSMUST00000157192 297 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm21772-201ENSMUST00000169213 478 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm17126-201ENSMUST00000172276 523 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm44370-201ENSMUST00000175436 112 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm22111-201ENSMUST00000178010 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm23687-201ENSMUST00000178664 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm24566-201ENSMUST00000179286 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm23305-201ENSMUST00000179342 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm26389-201ENSMUST00000179819 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm22130-201ENSMUST00000179979 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm22393-201ENSMUST00000180153 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm25085-201ENSMUST00000180298 79 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm6057-201ENSMUST00000195927 314 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm29745-201ENSMUST00000198005 687 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm7166-201ENSMUST00000199715 303 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm43136-201ENSMUST00000200403 636 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm42646-201ENSMUST00000202233 914 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Clec2j-202ENSMUST00000203658 606 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm34701-202ENSMUST00000204685 360 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm7042-201ENSMUST00000223027 384 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm6104-201ENSMUST00000078030 603 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdha9Q91Y11 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdha9Q91Y11 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdha9Q91Y11 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.21□□□□□ -1.41
Pcdha9Q91Y11 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Pcdha9Q91Y11 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Pcdha9Q91Y11 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm8569-201ENSMUST00000117630 647 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm16007-201ENSMUST00000117837 286 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm26069-201ENSMUST00000157497 277 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm23279-201ENSMUST00000157912 97 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm16026-202ENSMUST00000159695 772 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm22650-201ENSMUST00000175138 105 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm23631-201ENSMUST00000175291 123 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm25246-201ENSMUST00000175476 69 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm24303-201ENSMUST00000178237 126 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm27210-201ENSMUST00000184263 402 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Gm44360-201ENSMUST00000200081 82 ntBASIC6.21□□□□□ -1.42
Pcdha9Q91Y11 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms