Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44225-201ENSMUST00000203582 186 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm24707-201ENSMUST00000082812 107 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.85□□□□□ -1.47
Clrn1Q8K445 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm13607-201ENSMUST00000117875 539 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm15785-201ENSMUST00000119145 694 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm14335-201ENSMUST00000119165 810 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm14360-201ENSMUST00000120670 393 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm5383-201ENSMUST00000121177 617 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm14229-201ENSMUST00000121178 850 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm13669-201ENSMUST00000122366 457 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm25052-201ENSMUST00000122661 158 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm26353-201ENSMUST00000158224 255 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm23022-201ENSMUST00000158768 180 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm24735-201ENSMUST00000158859 118 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm3091-201ENSMUST00000163408 484 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm43561-201ENSMUST00000199866 448 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm44281-201ENSMUST00000203090 166 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clrn1Q8K445 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Clrn1Q8K445 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Clrn1Q8K445 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Clrn1Q8K445 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Clrn1Q8K445 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.84□□□□□ -1.48
Clrn1Q8K445 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms