Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm29745-201ENSMUST00000198005 687 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm11360-201ENSMUST00000221898 262 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Snord59a-201ENSMUST00000082844 74 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm12245-201ENSMUST00000117266 357 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm4989-201ENSMUST00000118711 749 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm11761-201ENSMUST00000121392 445 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm27006-201ENSMUST00000182218 943 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37189-201ENSMUST00000192131 298 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37030-201ENSMUST00000194254 295 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm42452-201ENSMUST00000199749 617 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm42581-201ENSMUST00000201774 966 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm44074-201ENSMUST00000204562 337 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm17999-201ENSMUST00000211568 542 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28aQ8CEI3 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm13503-201ENSMUST00000119017 446 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm14805-201ENSMUST00000120172 340 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm27030-201ENSMUST00000182551 464 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm27219-201ENSMUST00000184633 742 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Mir6952-201ENSMUST00000185092 61 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm3605-201ENSMUST00000185858 440 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm5734-201ENSMUST00000189787 913 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm28640-201ENSMUST00000190918 550 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37659-201ENSMUST00000194574 111 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm44539-201ENSMUST00000206010 238 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm18955-201ENSMUST00000223173 649 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm22807-201ENSMUST00000082737 129 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.61□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.6□□□□□ -1.51
Ccdc28aQ8CEI3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28aQ8CEI3 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms