Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc38Q8CDN8 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.24□□□□□ -1.41
Ccdc38Q8CDN8 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc38Q8CDN8 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc38Q8CDN8 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc38Q8CDN8 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Mir290a-201ENSMUST00000104627 83 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm13473-201ENSMUST00000119289 367 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm15331-201ENSMUST00000120225 385 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm11852-201ENSMUST00000120806 222 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm25117-201ENSMUST00000157194 144 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm23233-201ENSMUST00000157301 137 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm23386-201ENSMUST00000158585 144 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm9006-201ENSMUST00000165520 841 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm24300-201ENSMUST00000177809 109 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm24017-201ENSMUST00000178726 109 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm23952-201ENSMUST00000179380 109 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm18698-201ENSMUST00000192327 668 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm44134-202ENSMUST00000204777 545 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc38Q8CDN8 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm24709-201ENSMUST00000104123 132 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm26144-201ENSMUST00000104475 132 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm14756-201ENSMUST00000116395 240 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm23903-201ENSMUST00000157566 131 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm16531-201ENSMUST00000180658 967 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm43015-201ENSMUST00000199087 565 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.22□□□□□ -1.41
Ccdc38Q8CDN8 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.21□□□□□ -1.41
Ccdc38Q8CDN8 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Ccdc38Q8CDN8 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms