Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC159622.1-201ENSMUST00000221004 554 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 CT025579.3-201ENSMUST00000224543 451 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.94□□□□□ -1.14
Usp40Q8BWR4 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm17164-201ENSMUST00000169013 506 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm22650-201ENSMUST00000175138 105 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm22698-201ENSMUST00000175375 108 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm22420-201ENSMUST00000178795 126 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm28017-201ENSMUST00000183434 126 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Ighv3-2-201ENSMUST00000191842 349 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm2429-201ENSMUST00000194635 586 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm7990-201ENSMUST00000212126 593 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm7588-201ENSMUST00000216866 571 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 AC164297.5-201ENSMUST00000224365 198 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm7887-201ENSMUST00000056948 537 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm10064-201ENSMUST00000071235 399 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm22807-201ENSMUST00000082737 129 ntBASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp40Q8BWR4 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm12732-201ENSMUST00000121688 180 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm23773-201ENSMUST00000158985 296 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Mir6417-201ENSMUST00000183815 116 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm5511-201ENSMUST00000189380 802 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm20776-201ENSMUST00000189940 700 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm45458-201ENSMUST00000209900 522 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm18852-201ENSMUST00000184149 3593 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm44586-201ENSMUST00000207166 2737 ntBASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp40Q8BWR4 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.91□□□□□ -1.14
Usp40Q8BWR4 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms