Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm22867-201ENSMUST00000157499 109 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm23386-201ENSMUST00000158585 144 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm4832-201ENSMUST00000182679 399 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm28527-201ENSMUST00000185210 297 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm45850-201ENSMUST00000212536 338 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm7042-201ENSMUST00000223027 384 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm22684-201ENSMUST00000082849 132 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm23686-201ENSMUST00000083241 164 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.9□□□□□ -1.46
Ccdc40Q8BI79 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.9□□□□□ -1.47
Ccdc40Q8BI79 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm12193-201ENSMUST00000117250 379 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm14529-201ENSMUST00000117894 406 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm22492-201ENSMUST00000157192 297 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm25227-201ENSMUST00000158204 112 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm20545-201ENSMUST00000174739 210 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm19560-201ENSMUST00000177510 514 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm8183-201ENSMUST00000183134 980 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Mir7222-201ENSMUST00000183740 75 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm31306-201ENSMUST00000197517 508 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm31166-201ENSMUST00000209326 288 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm45722-201ENSMUST00000213075 466 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm5612-201ENSMUST00000053326 375 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc40Q8BI79 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm14267-201ENSMUST00000119751 496 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm24382-201ENSMUST00000122698 107 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm23896-201ENSMUST00000158109 130 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm7166-201ENSMUST00000199715 303 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.88□□□□□ -1.47
Ccdc40Q8BI79 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms