Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm38226-201ENSMUST00000192207 521 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm6522-201ENSMUST00000197160 1203 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 AC137678.1-201ENSMUST00000198370 118 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm17956-201ENSMUST00000199931 838 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm7832-201ENSMUST00000202613 880 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm44523-201ENSMUST00000205616 417 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm31849-201ENSMUST00000220306 375 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Foxc1Q61572 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm23503-201ENSMUST00000083903 107 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm16391-201ENSMUST00000086601 447 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm36938-201ENSMUST00000191612 2696 ntBASIC5.72□□□□□ -1.49
Foxc1Q61572 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC5.72□□□□□ -1.49
Foxc1Q61572 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Foxc1Q61572 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Foxc1Q61572 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Foxc1Q61572 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC5.71□□□□□ -1.49
Foxc1Q61572 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.71□□□□□ -1.49
Foxc1Q61572 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Foxc1Q61572 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Foxc1Q61572 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm22934-201ENSMUST00000103961 132 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm7429-201ENSMUST00000118664 348 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm14186-201ENSMUST00000120804 137 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm11609-201ENSMUST00000121926 793 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm26351-201ENSMUST00000157532 232 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm7162-201ENSMUST00000161205 1024 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm24103-201ENSMUST00000174930 77 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm10105-201ENSMUST00000184601 270 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm28390-201ENSMUST00000185212 700 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm28266-201ENSMUST00000191410 439 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm36984-201ENSMUST00000192770 235 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm43914-201ENSMUST00000203592 594 ntBASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.71□□□□□ -1.5
Foxc1Q61572 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC5.71□□□□□ -1.5
Foxc1Q61572 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms