Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm29503-201ENSMUST00000191044 930 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm29664-201ENSMUST00000191125 463 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm44580-201ENSMUST00000206333 877 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 LOC665443-201ENSMUST00000212284 796 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trafd1Q3UDK1 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm13245-201ENSMUST00000119646 260 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm22214-201ENSMUST00000157563 172 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm23280-201ENSMUST00000157905 139 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm22420-201ENSMUST00000178795 126 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm27679-201ENSMUST00000184612 84 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm37966-201ENSMUST00000193122 326 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm44214-201ENSMUST00000204153 606 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gm4012-201ENSMUST00000221504 581 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.47□□□□□ -1.53
Trafd1Q3UDK1 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trafd1Q3UDK1 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm25595-201ENSMUST00000102273 97 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm15073-201ENSMUST00000117432 634 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm13451-201ENSMUST00000117649 592 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm12901-201ENSMUST00000118690 532 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm12583-201ENSMUST00000120677 853 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm26350-201ENSMUST00000157531 288 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm24731-201ENSMUST00000158227 131 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm6808-201ENSMUST00000162341 807 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm22993-201ENSMUST00000175423 254 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Mir3095-201ENSMUST00000175552 87 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm21139-201ENSMUST00000186594 877 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm45185-201ENSMUST00000207556 404 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm17988-201ENSMUST00000208796 535 ntBASIC5.46□□□□□ -1.54
Trafd1Q3UDK1 Gm45525-201ENSMUST00000210800 389 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms