Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm14769-201ENSMUST00000118590 432 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm2199-201ENSMUST00000119065 874 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm11484-201ENSMUST00000119808 338 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm14472-201ENSMUST00000119815 282 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm15959-201ENSMUST00000121724 368 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm37609-201ENSMUST00000191778 678 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm18553-201ENSMUST00000194152 634 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm43116-201ENSMUST00000199789 195 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm23927-201ENSMUST00000082466 215 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Trim43aQ3TL54 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm9428-201ENSMUST00000127214 769 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm23050-201ENSMUST00000158775 165 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm8185-201ENSMUST00000160999 669 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm26057-201ENSMUST00000178099 165 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm44214-201ENSMUST00000204153 606 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm7802-201ENSMUST00000216464 262 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Snora44-201ENSMUST00000082670 129 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Trim43aQ3TL54 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.84□□□□□ -1.48
Trim43aQ3TL54 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trim43aQ3TL54 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trim43aQ3TL54 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm14620-201ENSMUST00000120656 383 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Gm22867-201ENSMUST00000157499 109 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.83□□□□□ -1.48
Trim43aQ3TL54 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms