Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm43148-201ENSMUST00000198237 520 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.15□□□□□ -1.42
CiitaP79621 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CiitaP79621 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CiitaP79621 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.15□□□□□ -1.42
CiitaP79621 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.15□□□□□ -1.42
CiitaP79621 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CiitaP79621 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CiitaP79621 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CiitaP79621 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
CiitaP79621 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.15□□□□□ -1.43
CiitaP79621 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CiitaP79621 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CiitaP79621 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CiitaP79621 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CiitaP79621 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CiitaP79621 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
CiitaP79621 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm11270-201ENSMUST00000117685 471 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm3943-201ENSMUST00000118606 718 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm15741-201ENSMUST00000119401 754 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm11227-201ENSMUST00000119774 471 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm11255-201ENSMUST00000120448 1180 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm16107-201ENSMUST00000162523 862 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm3257-201ENSMUST00000207217 675 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm19880-201ENSMUST00000207731 318 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm6056-201ENSMUST00000221253 488 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CiitaP79621 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
CiitaP79621 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.14□□□□□ -1.43
CiitaP79621 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CiitaP79621 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CiitaP79621 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CiitaP79621 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.13□□□□□ -1.43
CiitaP79621 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CiitaP79621 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm13259-201ENSMUST00000120792 456 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm12267-201ENSMUST00000121609 761 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm22106-201ENSMUST00000122544 127 ntBASIC6.13□□□□□ -1.43
CiitaP79621 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 Gm17091-201ENSMUST00000163248 357 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.13□□□□□ -1.43
CiitaP79621 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 Gm4832-201ENSMUST00000182679 399 ntBASIC6.13□□□□□ -1.43
CiitaP79621 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm19891-201ENSMUST00000189771 303 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm17952-201ENSMUST00000193914 747 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm44132-201ENSMUST00000205142 151 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Gm44539-201ENSMUST00000206010 238 ntBASIC6.13□□□□□ -1.43
CiitaP79621 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.13□□□□□ -1.43
CiitaP79621 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.13□□□□□ -1.43
CiitaP79621 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CiitaP79621 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms