Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Hmgb1P63158 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.79□□□□□ -1.32
Hmgb1P63158 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC6.79□□□□□ -1.32
Hmgb1P63158 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.79□□□□□ -1.32
Hmgb1P63158 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm43967-201ENSMUST00000203787 301 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm5318-201ENSMUST00000205249 406 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm18600-201ENSMUST00000207205 505 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm6009-201ENSMUST00000210848 280 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm8264-201ENSMUST00000217801 465 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 AC158807.1-201ENSMUST00000217959 187 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm9237-201ENSMUST00000221499 548 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm26064-201ENSMUST00000083381 109 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hmgb1P63158 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.79□□□□□ -1.32
Hmgb1P63158 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm11197-201ENSMUST00000145158 839 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm25185-201ENSMUST00000157754 96 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm6673-201ENSMUST00000166114 700 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm27185-201ENSMUST00000184296 247 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm20128-201ENSMUST00000196189 417 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm7554-201ENSMUST00000202282 574 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm18805-201ENSMUST00000206872 655 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm22581-201ENSMUST00000083735 136 ntBASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hmgb1P63158 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hmgb1P63158 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Hmgb1P63158 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Hmgb1P63158 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.77□□□□□ -1.32
Hmgb1P63158 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hmgb1P63158 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.77□□□□□ -1.33
Hmgb1P63158 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Hmgb1P63158 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.77□□□□□ -1.33
Hmgb1P63158 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hmgb1P63158 AC160931.3-201ENSMUST00000222111 2267 ntBASIC6.77□□□□□ -1.33
Hmgb1P63158 Gm26340-201ENSMUST00000102365 99 ntBASIC6.77□□□□□ -1.33
Hmgb1P63158 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hmgb1P63158 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hmgb1P63158 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hmgb1P63158 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.77□□□□□ -1.33
Hmgb1P63158 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms