Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm44801-201ENSMUST00000207644 2060 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Dcdc5-202ENSMUST00000122388 4957 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm23274-201ENSMUST00000104056 130 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22468-201ENSMUST00000116680 120 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm26248-201ENSMUST00000116700 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm26137-201ENSMUST00000116701 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm26190-201ENSMUST00000116704 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24617-201ENSMUST00000116705 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25778-201ENSMUST00000116713 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25774-201ENSMUST00000116717 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22102-201ENSMUST00000116730 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm23177-201ENSMUST00000116784 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24193-201ENSMUST00000116801 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24744-201ENSMUST00000116833 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24427-201ENSMUST00000116896 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22346-201ENSMUST00000116918 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm23606-201ENSMUST00000116938 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22029-201ENSMUST00000116940 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm26298-201ENSMUST00000116956 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm23844-201ENSMUST00000116959 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24484-201ENSMUST00000117009 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25347-201ENSMUST00000117026 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22112-201ENSMUST00000117032 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25293-201ENSMUST00000122792 285 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm23534-201ENSMUST00000157539 97 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm22991-201ENSMUST00000178126 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25754-201ENSMUST00000178653 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm22419-201ENSMUST00000178780 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24802-201ENSMUST00000178897 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25208-201ENSMUST00000178964 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm24567-201ENSMUST00000179294 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm23943-201ENSMUST00000179712 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm25228-201ENSMUST00000180121 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm23304-201ENSMUST00000180209 121 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm29072-201ENSMUST00000191149 678 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm45228-201ENSMUST00000206585 352 ntBASIC8.35□□□□□ -1.07
Cux1P53564 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm42508-201ENSMUST00000199972 3292 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cux1P53564 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Cux1P53564 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Cux1P53564 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cux1P53564 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cux1P53564 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.35□□□□□ -1.07
Cux1P53564 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cux1P53564 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Cux1P53564 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Gm16149-201ENSMUST00000117631 309 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Gm11369-201ENSMUST00000120812 318 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Gm25179-201ENSMUST00000122632 128 ntBASIC8.34□□□□□ -1.07
Cux1P53564 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC8.34□□□□□ -1.07
Cux1P53564 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Gm6906-201ENSMUST00000218014 569 ntBASIC8.34□□□□□ -1.07
Cux1P53564 AC124732.4-201ENSMUST00000220930 1274 ntBASIC8.34□□□□□ -1.07
Cux1P53564 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cux1P53564 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 AC120375.1-201ENSMUST00000227034 3612 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC8.34□□□□□ -1.07
Cux1P53564 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Cux1P53564 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Robo2-210ENSMUST00000226478 8059 ntBASIC8.34□□□□□ -1.07
Cux1P53564 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cux1P53564 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC8.34□□□□□ -1.07
Cux1P53564 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cux1P53564 Gm37076-201ENSMUST00000192033 2294 ntBASIC8.34□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms