Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm6166-201ENSMUST00000098689 409 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm43921-201ENSMUST00000204296 1792 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.61□□□□□ -1.19
Rfx1P48377 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm43313-201ENSMUST00000201398 2235 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Rfx1P48377 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm37926-201ENSMUST00000191922 2424 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC7.6□□□□□ -1.19
Rfx1P48377 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm25593-201ENSMUST00000102272 96 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Rfx1P48377 Mir190b-201ENSMUST00000104803 80 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Rfx1P48377 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm11914-201ENSMUST00000117094 507 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm12135-201ENSMUST00000119170 466 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm13338-201ENSMUST00000120235 361 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm12880-201ENSMUST00000120652 494 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.6□□□□□ -1.19
Rfx1P48377 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm23954-201ENSMUST00000157213 353 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm7418-201ENSMUST00000162120 801 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm6673-201ENSMUST00000166114 700 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm18588-201ENSMUST00000177308 492 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm26652-202ENSMUST00000181672 475 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm27266-201ENSMUST00000184521 123 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm28580-201ENSMUST00000186767 88 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm4785-201ENSMUST00000191025 751 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm37620-201ENSMUST00000192910 501 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm19739-201ENSMUST00000195941 153 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm32983-201ENSMUST00000208500 505 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Gm18160-201ENSMUST00000214279 827 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7.6□□□□□ -1.19
Rfx1P48377 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Rfx1P48377 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 n-R5s168-201ENSMUST00000083948 104 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Rfx1P48377 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.6□□□□□ -1.19
Rfx1P48377 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Rfx1P48377 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms