Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm31861-201ENSMUST00000204563 672 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.68□□□□□ -1.5
Lire1P11260 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm19195-201ENSMUST00000222018 511 ntBASIC5.68□□□□□ -1.5
Lire1P11260 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.68□□□□□ -1.5
Lire1P11260 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.68□□□□□ -1.5
Lire1P11260 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.68□□□□□ -1.5
Lire1P11260 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Lire1P11260 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Lire1P11260 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Lire1P11260 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.67□□□□□ -1.5
Lire1P11260 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.67□□□□□ -1.5
Lire1P11260 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm13902-201ENSMUST00000120168 605 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm9428-201ENSMUST00000127214 769 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm28660-201ENSMUST00000186496 253 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.67□□□□□ -1.5
Lire1P11260 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm37758-201ENSMUST00000194275 629 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm9517-201ENSMUST00000195021 874 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Mir142-201ENSMUST00000198092 64 ntBASIC5.67□□□□□ -1.5
Lire1P11260 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm20074-201ENSMUST00000208144 484 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm23407-201ENSMUST00000082538 91 ntBASIC5.67□□□□□ -1.5
Lire1P11260 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.67□□□□□ -1.5
Lire1P11260 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lire1P11260 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lire1P11260 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lire1P11260 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.67□□□□□ -1.5
Lire1P11260 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lire1P11260 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lire1P11260 Gm23739-201ENSMUST00000102295 108 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lire1P11260 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.66□□□□□ -1.5
Lire1P11260 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lire1P11260 Gm22235-201ENSMUST00000157085 110 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm25487-201ENSMUST00000158725 125 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm23343-201ENSMUST00000158964 143 ntBASIC5.66□□□□□ -1.5
Lire1P11260 Gm27512-201ENSMUST00000175328 126 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms